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How to Separate Organic Molecules by High-Performance Liquid Chromatography?

1. Sample Preparation:

First, you need to prepare your samples. This usually involves dissolving the sample in an appropriate solvent. The solvent should be compatible with the mobile phase used during the chromatography process.


2. Selecting an Appropriate Chromatography Column:

The chromatography column is packed with a stationary phase, which is a porous medium composed of tiny particles. The material and size of the particles, as well as the chemical properties of the stationary phase, will affect the separation efficiency. Common chromatography columns include:


1. Reverse Phase Columns (e.g., C18, C8 columns):

Suitable for separating less polar organic molecules, such as fatty acids, peptides, hormones, etc.


2. Normal Phase Columns (e.g., silica columns):

Suitable for separating more polar organic molecules, such as sugars, nucleic acids, polyols, etc.


3. Affinity Chromatography Columns:

Suitable for organic molecules with specific affinities, such as proteins binding to specific ligands.


4. Ion Exchange Chromatography Columns:

Suitable for charged organic molecules, such as amino acids, nucleic acids, etc.


5. Size Exclusion Chromatography (SEC) Columns:

Suitable for separating organic molecules based on molecular size.


3.Choosing the Mobile Phase:

The mobile phase is the liquid that flows through the stationary phase. Sample molecules distribute between the mobile and stationary phases, which is the mechanism for achieving separation. Choosing an appropriate mobile phase is also crucial, as it affects the separation efficiency. The mobile phase can be a pure solvent or a solvent mixture. Common mobile phases include water, acetonitrile, methanol, water/acetonitrile, water/methanol, etc. Depending on the need, buffer salts, acids, or bases can be added to the mobile phase to adjust pH or ionic strength.


4. Running the Chromatography Program:

At the start of the chromatography program, the sample solution containing the components to be separated is injected into the chromatography column. Then, the mobile phase flows through the column under high pressure. Each component is separated due to different distribution between the stationary and mobile phases.


5. Detection and Analysis:

As the sample passes through the column, a detector records the characteristics of the sample. This often involves measuring the UV absorption of the sample, but other types of detectors can also be used. Then, by analyzing these data, various organic molecules in the sample can be identified and quantified.


When selecting the chromatography column, mobile phase, and detector, it is important to consider the characteristics of the sample, including the size, polarity, and stability of the sample molecules. By adjusting these parameters, you can optimize the chromatography program to achieve the best separation results.


BiotechPack, A Biopharmaceutical Characterization and Multi-Omics Mass Spectrometry (MS) Services Provider


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HPLC Detection of Protein Purity

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