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How to isolate and purify protein bands after SDS-PAGE?

After SDS-PAGE electrophoresis, if you wish to recover a specific protein band from the gel, you can purify it through the following steps:


1. Gel Staining and Destaining:

  • First, stain the entire electrophoresis gel with an appropriate dye (such as Coomassie Brilliant Blue).
  • After a certain period, destain with a destaining solution until the desired protein band is clearly visible.

2. Gel Cutting:

Use a clean, sharp blade or scissors to cut along the stained protein band, minimizing the parts of the gel that do not contain protein.


3. Protein Extraction:

  • Place the cut gel piece into a microcentrifuge tube.
  • Add an appropriate extraction solution (such as 50 mM Tris-HCl, pH 8.0, containing 0.1% SDS or other suitable buffer).
  • Shake or vortex the gel piece in the solution for a period of time to allow the protein to diffuse from the gel into the liquid.
  • Centrifuge to collect the protein solution in the liquid and discard the gel piece.

4. Protein Concentration and Further Purification:

  • Use a protein concentrator (such as an Amicon or other brand ultrafiltration device) to concentrate the protein solution.
  • Depending on the need, other purification methods like affinity chromatography, ion exchange chromatography, or gel filtration chromatography can be used to further purify or enrich specific proteins.

5. Protein Identification:

To confirm the identity of the purified protein, mass spectrometry or other biochemical analysis methods can be used for identification.


BiotechPack, A Biopharmaceutical Characterization and Multi-Omics Mass Spectrometry (MS) Services Provider


Related Services:

SDS-PAGE based Protein Separation

Two-Dimensional Gel Electrophoresis Services

2D Blue Native/SDS-PAGE Complex Analysis Services

1D SDS-PAGE and IEF Services

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